nsv4550156
- Organism: Homo sapiens
- Study:nstd166 (gnomAD Structural Variants)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):gnomAD_Structural_Variants
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 25 SVs from 4 studies. See in: genome view
Overlapping variant regions from other studies: 5 SVs from 2 studies. See in: genome view
Overlapping variant regions from other studies: 22 SVs from 4 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4550156 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 38,751,735 | 38,751,735 |
| nsv4550156 | Remapped | Perfect | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NT_187614.1 | Chr17|NT_1 87614.1 | 2,787,054 | 2,787,054 |
| nsv4550156 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000017.10 | Chr17 | 36,907,988 | 36,907,988 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16017495 | insertion | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16017495 | Remapped | Perfect | NT_187614.1:g.2787 054_2787055ins61 | GRCh38.p12 | Second Pass | NT_187614.1 | Chr17|NT_1 87614.1 | 2,787,054 | 2,787,054 |
| nssv16017495 | Remapped | Perfect | NC_000017.11:g.387 51735_38751736ins6 1 | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 38,751,735 | 38,751,735 |
| nssv16017495 | Submitted genomic | NC_000017.10:g.369 07988_36907989ins6 1 | GRCh37.p13 | NC_000017.10 | Chr17 | 36,907,988 | 36,907,988 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16017495 | <0.001 | 3 | 21630 |