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dbVar

Database of genomic structural variation

nsv4645132

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:46,326

Description:nsv4047385 from gnomAD Structural Variants. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 325 SVs from 28 studies. See in: genome view

Remapped(Score: Perfect):9,490,316-9,536,641

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4645132	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000024.10	ChrY	9,490,316	9,536,641
nsv4645132	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000024.9	ChrY	9,327,925	9,374,250

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16157308	copy number variation	Curated	Curated
nssv16165985	copy number variation	Curated	Curated
nssv16169205	copy number variation	Curated	Curated
nssv16178867	copy number variation	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16157308	Remapped	Perfect	GRCh38.p12	First Pass	NC_000024.10	ChrY	9,490,316	9,536,641
nssv16165985	Remapped	Perfect	GRCh38.p12	First Pass	NC_000024.10	ChrY	9,490,316	9,536,641
nssv16169205	Remapped	Perfect	GRCh38.p12	First Pass	NC_000024.10	ChrY	9,490,316	9,536,641
nssv16178867	Remapped	Perfect	GRCh38.p12	First Pass	NC_000024.10	ChrY	9,490,316	9,536,641
nssv16157308	Submitted genomic		GRCh37 (hg19)		NC_000024.9	ChrY	9,327,925	9,374,250
nssv16165985	Submitted genomic		GRCh37 (hg19)		NC_000024.9	ChrY	9,327,925	9,374,250
nssv16169205	Submitted genomic		GRCh37 (hg19)		NC_000024.9	ChrY	9,327,925	9,374,250
nssv16178867	Submitted genomic		GRCh37 (hg19)		NC_000024.9	ChrY	9,327,925	9,374,250

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16157308	0.301	1672	5551
nssv16165985	0.604	3354	5551
nssv16169205	0.028	156	5551
nssv16178867	0.059	329	5551

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