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dbVar

Database of genomic structural variation

nsv4656865

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element deletion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:349

Description:esv3829278 from 1000 Genomes Consortium Phase 3 Integrated SV. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 144 SVs from 39 studies. See in: genome view

Remapped(Score: Perfect):10,355,773-10,356,121

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4656865	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	10,355,773	10,356,121
nsv4656865	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	10,397,457	10,397,805

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16187754	alu deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16187754	Remapped	Perfect	NC_000003.12:g.103 55773_10356121del	GRCh38.p12	First Pass	NC_000003.12	Chr3	10,355,773	10,356,121
nssv16187754	Submitted genomic		NC_000003.11:g.103 97457_10397805del	GRCh37 (hg19)		NC_000003.11	Chr3	10,397,457	10,397,805

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16187754	0.478	2392	5008

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