nsv4675680
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:11,029,729
- Description:GRCh37/hg19 11q22.3-23.2(chr11:103320065-114349787)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 26630 SVs from 126 studies. See in: genome view
Overlapping variant regions from other studies: 26637 SVs from 126 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4675680 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 103,449,337 | 114,479,065 |
| nsv4675680 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 103,320,065 | 114,349,787 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16208314 | copy number loss | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV001006439.1, VCV000815462.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16208314 | Remapped | Perfect | NC_000011.10:g.(?_ 103449337)_(114479 065_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 103,449,337 | 114,479,065 |
| nssv16208314 | Submitted genomic | NC_000011.9:g.(?_1 03320065)_(1143497 87_?)del | GRCh37 (hg19) | NC_000011.9 | Chr11 | 103,320,065 | 114,349,787 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16208314 | GRCh37: NC_000011.9:g.(?_103320065)_(114349787_?)del | copy number loss | germline | not provided | Pathogenic | ClinVar | RCV001006439.1, VCV000815462.1 | 1 |