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dbVar

Database of genomic structural variation

nsv4715613

Organism: Homo sapiens

Study:nstd195 (Mwapagha et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:18,551

Publication(s):Mwapagha et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 585 SVs from 76 studies. See in: genome view

Remapped(Score: Perfect):90,290,786-90,309,336

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4715613	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	90,290,786	90,309,336
nsv4715613	Remapped	Perfect	GRCh38.p12	ALT_REF_LOCI_1	Second Pass	NT_187524.1	Chr2\|NT_18 7524.1	93,187	111,737
nsv4715613	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	90,464,701	90,483,251

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Copy number	Other Calls in this Sample and Study
nssv16242893	copy number variation	B381	Sequencing	Paired-end mapping	3	5,743

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16242893	Remapped	Perfect	GRCh38.p12	Second Pass	NT_187524.1	Chr2\|NT_18 7524.1	93,187	111,737
nssv16242893	Remapped	Perfect	GRCh38.p12	First Pass	NC_000002.12	Chr2	90,290,786	90,309,336
nssv16242893	Submitted genomic		GRCh37 (hg19)		NC_000002.11	Chr2	90,464,701	90,483,251

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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