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dbVar

Database of genomic structural variation

nsv4716340

Organism: Homo sapiens

Study:nstd195 (Mwapagha et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2

Publication(s):Mwapagha et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 106 SVs from 34 studies. See in: genome view

Remapped(Score: Perfect):61,099,411-61,099,412

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4716340	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	61,099,411	61,099,412
nsv4716340	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	60,866,883	60,866,884

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Copy number	Other Calls in this Sample and Study
nssv16233041	deletion	M456	Sequencing	Paired-end mapping	1	4,735

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16233041	Remapped	Perfect	NC_000011.10:g.610 99411_61099412del	GRCh38.p12	First Pass	NC_000011.10	Chr11	61,099,411	61,099,412
nssv16233041	Submitted genomic		NC_000011.9:g.6086 6883_60866884del	GRCh37 (hg19)		NC_000011.9	Chr11	60,866,883	60,866,884

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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