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dbVar

Database of genomic structural variation

nsv4728563

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:59,381

Description:GRCh37/hg19 1p31.3(chr1:64002855-64062235)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 239 SVs from 41 studies. See in: genome view

Remapped(Score: Perfect):63,537,184-63,596,564

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4728563	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	63,537,184	63,596,564
nsv4728563	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	64,002,855	64,062,235

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv16254166	copy number loss	Multiple	Multiple	not provided	Uncertain significance	ClinVar	RCV001259074.1, VCV000979898.1	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv16254166	Remapped	Perfect	NC_000001.11:g.(?_ 63537184)_(6359656 4_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	63,537,184	63,596,564
nssv16254166	Submitted genomic		NC_000001.10:g.(?_ 64002855)_(6406223 5_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	64,002,855	64,062,235

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv16254166	GRCh37: NC_000001.10:g.(?_64002855)_(64062235_?)del	copy number loss	germline	not provided	Uncertain significance	ClinVar	RCV001259074.1, VCV000979898.1	1

No genotype data were submitted for this variant

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