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dbVar

Database of genomic structural variation

nsv4740554

Organism: Homo sapiens

Study:nstd199 (Quan et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:333

Publication(s):Quan et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 114 SVs from 38 studies. See in: genome view

Remapped(Score: Perfect):56,267,628-56,267,960

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4740554	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	56,267,628	56,267,960
nsv4740554	Remapped	Perfect	GRCh38.p12	ALT_REF_LOCI_1	Second Pass	NW_003871073.1	Chr11\|NW_0 03871073.1	78,377	78,709
nsv4740554	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	56,035,104	56,035,436

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16281275	deletion	Sequencing	Split read mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16281275	Remapped	Perfect	NW_003871073.1:g.7 8377_78709del	GRCh38.p12	Second Pass	NW_003871073.1	Chr11\|NW_0 03871073.1	78,377	78,709
nssv16281275	Remapped	Perfect	NC_000011.10:g.562 67628_56267960del	GRCh38.p12	First Pass	NC_000011.10	Chr11	56,267,628	56,267,960
nssv16281275	Submitted genomic		NC_000011.9:g.5603 5104_56035436del	GRCh37 (hg19)		NC_000011.9	Chr11	56,035,104	56,035,436

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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