nsv510681
- Organism: Homo sapiens
- Study:nstd49 (Teague et al. 2010)
- Variant Type:copy number variation
- Method Type:Optical mapping
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:56,674
- Publication(s):Teague et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 361 SVs from 61 studies. See in: genome view
Overlapping variant regions from other studies: 361 SVs from 61 studies. See in: genome view
Overlapping variant regions from other studies: 8 SVs from 2 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv510681 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 23,715,974 | 23,772,647 |
| nsv510681 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 23,727,295 | 23,783,968 |
| nsv510681 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000016.8 | Chr16 | 23,634,796 | 23,691,469 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|---|---|
| nssv617425 | deletion | CHM | Optical mapping | Optical mapping | Hydatidiform Mole | not provided | Submitter | 1,350 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv617425 | Remapped | Perfect | NC_000016.10:g.(23 715974_?)_(?_23772 647)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 23,715,974 | 23,772,647 |
| nssv617425 | Remapped | Perfect | NC_000016.9:g.(237 27295_?)_(?_237839 68)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 23,727,295 | 23,783,968 |
| nssv617425 | Submitted genomic | NC_000016.8:g.(236 34796_?)_(?_236914 69)del4675 | NCBI35 (hg17) | NC_000016.8 | Chr16 | 23,634,796 | 23,691,469 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | Sample ID | HGVS | Type | Subject Phenotype | Clinical Interpretation | Source of Interpretation | Gender | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|---|---|
| nssv617425 | CHM | NCBI35: NC_000016.8:g.(23634796_?)_(?_23691469)del4675 | deletion | Hydatidiform Mole | not provided | Submitter | Female | 1,350 |