nsv511006
- Organism: Homo sapiens
- Study:nstd49 (Teague et al. 2010)
- Variant Type:complex substitution
- Method Type:Optical mapping
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:32,532
- Publication(s):Teague et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 175 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 36 SVs from 12 studies. See in: genome view
Overlapping variant regions from other studies: 178 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 19 SVs from 7 studies. See in: genome view
Overlapping variant regions from other studies: 3 SVs from 3 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv511006 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 56,355,284 | - | 56,387,815 |
| nsv511006 | Remapped | Pass | GRCh38.p12 | ALT_REF_LOCI_1 | Second Pass | NW_003871073.1 | Chr11|NW_0 03871073.1 | 166,033 | 187,300 | - |
| nsv511006 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 56,122,760 | - | 56,155,291 |
| nsv511006 | Remapped | Pass | GRCh37.p13 | PATCHES | Second Pass | NW_003871073.1 | Chr11|NW_0 03871073.1 | 166,033 | 200,998 | - |
| nsv511006 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000011.8 | Chr11 | 55,879,336 | - | 55,911,867 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv621569 | Remapped | Pass | GRCh38.p12 | Second Pass | NW_003871073.1 | Chr11|NW_0 03871073.1 | 166,033 | 187,300 | - |
| nssv621569 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 56,355,284 | - | 56,387,815 |
| nssv621569 | Remapped | Pass | GRCh37.p13 | Second Pass | NW_003871073.1 | Chr11|NW_0 03871073.1 | 166,033 | 200,998 | - |
| nssv621569 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 56,122,760 | - | 56,155,291 |
| nssv621569 | Submitted genomic | NCBI35 (hg17) | NC_000011.8 | Chr11 | 55,879,336 | - | 55,911,867 |