nsv511444
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:10,133
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 353 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 353 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 190 SVs from 24 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv511444 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 112,351,902 | 112,353,831 | 112,356,817 | 112,362,034 |
| nsv511444 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 114,111,660 | 114,113,589 | 114,116,575 | 114,121,792 |
| nsv511444 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 114,101,650 | 114,103,579 | 114,106,565 | 114,111,782 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv626057 | copy number gain | 1 | SNP array | SNP genotyping analysis | 2,637 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv626057 | Remapped | Perfect | NC_000010.11:g.(11 2351902_112353831) _(112356817_112362 034)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 112,351,902 | 112,353,831 | 112,356,817 | 112,362,034 |
| nssv626057 | Remapped | Perfect | NC_000010.10:g.(11 4111660_114113589) _(114116575_114121 792)dup | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 114,111,660 | 114,113,589 | 114,116,575 | 114,121,792 |
| nssv626057 | Submitted genomic | NC_000010.9:g.(114 101650_114103579)_ (114106565_1141117 82)dup | NCBI36 (hg18) | NC_000010.9 | Chr10 | 114,101,650 | 114,103,579 | 114,106,565 | 114,111,782 |