nsv5232728
- Organism: Homo sapiens
- Study:nstd204 (Chen et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,054
- Publication(s):Chen et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 162 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 158 SVs from 38 studies. See in: genome view
Overlapping variant regions from other studies: 39 SVs from 18 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5232728 | Submitted genomic | GRCh38.p13 | Primary Assembly | NC_000007.14 | Chr7 | 75,415,131 | 75,417,184 | ||
| nsv5232728 | Remapped | Good | GRCh37.p13 | Primary Assembly | Second Pass | NC_000007.13 | Chr7 | 75,044,409 | 75,046,467 |
| nsv5232728 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_003871064.1 | Chr7|NW_00 3871064.1 | 2,944,367 | 2,946,420 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16809785 | copy number variation | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv16809785 | Submitted genomic | GRCh38.p13 | NC_000007.14 | Chr7 | 75,415,131 | 75,417,184 | ||
| nssv16809785 | Remapped | Perfect | GRCh37.p13 | First Pass | NW_003871064.1 | Chr7|NW_00 3871064.1 | 2,944,367 | 2,946,420 |
| nssv16809785 | Remapped | Good | GRCh37.p13 | Second Pass | NC_000007.13 | Chr7 | 75,044,409 | 75,046,467 |