nsv5289578
- Organism: Homo sapiens
- Study:nstd204 (Chen et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:53,354
- Publication(s):Chen et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 199 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 48 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5289578 | Submitted genomic | GRCh38.p13 | Primary Assembly | NC_000020.11 | Chr20 | 29,521,596 | 29,574,949 | ||
| nsv5289578 | Remapped | Pass | GRCh37.p13 | Primary Assembly | Second Pass | NT_167213.1 | Unplaced|N T_167213.1 | 48,684 | 135,000 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16789463 | copy number variation | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv16789463 | Submitted genomic | GRCh38.p13 | NC_000020.11 | Chr20 | 29,521,596 | 29,574,949 | ||
| nssv16789463 | Remapped | Pass | GRCh37.p13 | Second Pass | NT_167213.1 | Unplaced|N T_167213.1 | 48,684 | 135,000 |