nsv536630
- Organism: Homo sapiens
- Study:nstd54 (Cooper et al. 2011)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:90,732
- Publication(s):Cooper et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 252 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 252 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 67 SVs from 14 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv536630 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 86,652,553 | 86,743,284 |
| nsv536630 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 86,701,703 | 86,792,434 |
| nsv536630 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000003.10 | Chr3 | 86,784,393 | 86,875,124 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1159255 | copy number gain | 9885322 | Oligo aCGH | Probe signal intensity | nssv1156798 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1159255 | Remapped | Perfect | NC_000003.12:g.(?_ 86652553)_(8674328 4_?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 86,652,553 | 86,743,284 |
| nssv1159255 | Remapped | Perfect | NC_000003.11:g.(?_ 86701703)_(8679243 4_?)dup | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 86,701,703 | 86,792,434 |
| nssv1159255 | Submitted genomic | NC_000003.10:g.(?_ 86784393)_(8687512 4_?)dup | NCBI36 (hg18) | NC_000003.10 | Chr3 | 86,784,393 | 86,875,124 |