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dbVar

Database of genomic structural variation

nsv5578536

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,280

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 188 SVs from 41 studies. See in: genome view

Submitted genomic57,322,146-57,326,425

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5578536	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	57,322,146	57,326,425
nsv5578536	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	57,549,281	57,553,560

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17114741	deletion	HG02818	Sequencing	Sequence alignment	3,473

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17114741	Submitted genomic		NC_000002.12:g.573 22146_57326425delT	GRCh38 (hg38)		NC_000002.12	Chr2	57,322,146	57,326,425
nssv17114741	Remapped	Perfect	NC_000002.11:g.575 49281_57553560delT	GRCh37.p13	First Pass	NC_000002.11	Chr2	57,549,281	57,553,560

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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