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dbVar

Database of genomic structural variation

nsv5669729

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:inversion
Method Type:Optical mapping, Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:36,181

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 172 SVs from 40 studies. See in: genome view

Submitted genomic40,333,147-40,369,327

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5669729	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000015.10	Chr15	40,333,147	40,369,327
nsv5669729	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	40,625,348	40,661,528

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17092095	inversion	SAMN00001695	Optical mapping, Sequencing	Optical mapping, Sequence alignment	6,153

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17092095	Submitted genomic		NC_000015.10:g.403 33147_40369327inv	GRCh38 (hg38)		NC_000015.10	Chr15	40,333,147	40,369,327
nssv17092095	Remapped	Perfect	NC_000015.9:g.4062 5348_40661528inv	GRCh37.p13	First Pass	NC_000015.9	Chr15	40,625,348	40,661,528

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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