nsv5674171
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37, GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:4,962
- Description:NC_012920.1:m.10106_15067del4962 AND Mitochondrial disease
- Publication(s):Chinnery et al. 2000, Parikh et al. 2014, Parikh et al. 2017
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 31 SVs from 2 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|
| nsv5674171 | Submitted genomic | GRCh38 (hg38) | non-nuclear | NC_012920.1 | ChrMT | 10,105 | 15,066 |
| nsv5674171 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_001807.4 | ChrMT | 10,105 | 15,066 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv15128605 | deletion | Multiple | Multiple | Mitochondrial disease; Mitochondrial diseases | Pathogenic | ClinVar | RCV000495541.1, VCV000430684.1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | HGVS | Assembly | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|
| nssv15128605 | Submitted genomic | NC_012920.1:g.1010 5_15066del | GRCh38 (hg38) | NC_012920.1 | ChrMT | 10,105 | 15,066 |
| nssv15128605 | Submitted genomic | NC_001807.4:g.1010 5_15066del | GRCh37 (hg19) | NC_001807.4 | ChrMT | 10,105 | 15,066 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv15128605 | GRCh37: NC_001807.4:g.10105_15066del, GRCh38: NC_012920.1:g.10105_15066del | deletion | germline | Mitochondrial disease; Mitochondrial diseases | Pathogenic | ClinVar | RCV000495541.1, VCV000430684.1 |