nsv5709876
- Organism: Homo sapiens
- Study:nstd211 (Chuang et al. 2021)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:Insertion of a Alu mobile element relative to the reference
- Publication(s):Chuang et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 97 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 97 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5709876 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000017.11 | Chr17 | 28,912,071 | 28,912,071 | ||
| nsv5709876 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000017.10 | Chr17 | 27,239,089 | 27,239,089 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17199898 | alu insertion | Sequencing | Other |
| nssv17214332 | alu insertion | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17199898 | Submitted genomic | NC_000017.11:g.289 12071_28912072ins2 57 | GRCh38 (hg38) | NC_000017.11 | Chr17 | 28,912,071 | 28,912,071 | ||
| nssv17214332 | Submitted genomic | NC_000017.11:g.289 12071_28912072ins2 57 | GRCh38 (hg38) | NC_000017.11 | Chr17 | 28,912,071 | 28,912,071 | ||
| nssv17199898 | Remapped | Perfect | NC_000017.10:g.272 39089_27239090ins2 57 | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 27,239,089 | 27,239,089 |
| nssv17214332 | Remapped | Perfect | NC_000017.10:g.272 39089_27239090ins2 57 | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 27,239,089 | 27,239,089 |