nsv5885502
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:34,795
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 190 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 226 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 64 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5885502 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000020.11 | Chr20 | 29,523,785 | 29,558,579 | ||
| nsv5885502 | Remapped | Pass | GRCh37.p13 | Primary Assembly | Second Pass | NC_000020.10 | Chr20 | 29,560,384 | 29,581,832 |
| nsv5885502 | Remapped | Pass | GRCh37.p13 | Primary Assembly | Second Pass | NT_167213.1 | Unplaced|N T_167213.1 | 48,684 | 135,000 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv17484570 | copy number variation | Sequencing | Sequence alignment | 0 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv17484570 | Submitted genomic | GRCh38 (hg38) | NC_000020.11 | Chr20 | 29,523,785 | 29,558,579 | ||
| nssv17484570 | Remapped | Pass | GRCh37.p13 | Second Pass | NC_000020.10 | Chr20 | 29,560,384 | 29,581,832 |
| nssv17484570 | Remapped | Pass | GRCh37.p13 | Second Pass | NT_167213.1 | Unplaced|N T_167213.1 | 48,684 | 135,000 |