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dbVar

Database of genomic structural variation

nsv5897473

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:85,124

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2764 SVs from 105 studies. See in: genome view

Submitted genomic31,268,745-31,353,868

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5897473	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000006.12	Chr6	31,268,745	31,353,868
nsv5897473	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	31,236,522	31,321,645

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17431671	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17431671	Submitted genomic		NC_000006.12:g.312 68745_31353868del	GRCh38 (hg38)		NC_000006.12	Chr6	31,268,745	31,353,868
nssv17431671	Remapped	Perfect	NC_000006.11:g.312 36522_31321645del	GRCh37.p13	First Pass	NC_000006.11	Chr6	31,236,522	31,321,645

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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