Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5993682

Organism: Homo sapiens

Study:nstd212 (Wu et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:84

Publication(s):Wu et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 132 SVs from 34 studies. See in: genome view

Submitted genomic58,652,559-58,652,642

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5993682	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	58,652,559	58,652,642
nsv5993682	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	58,638,286	58,638,369

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17540081	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17540081	Submitted genomic		NC_000003.12:g.586 52559_58652642del	GRCh38 (hg38)		NC_000003.12	Chr3	58,652,559	58,652,642
nssv17540081	Remapped	Perfect	NC_000003.11:g.586 38286_58638369del	GRCh37.p13	First Pass	NC_000003.11	Chr3	58,638,286	58,638,369

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI