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dbVar

Database of genomic structural variation

nsv6123472

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:311

Description:nsv5529389 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 93 SVs from 26 studies. See in: genome view

Remapped(Score: Perfect):2,499,185-2,499,495

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6123472	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000020.11	Chr20	2,499,185	2,499,495
nsv6123472	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000020.10	Chr20	2,479,831	2,480,141

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17968185	deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17968185	Remapped	Perfect	NC_000020.11:g.249 9185_2499495del	GRCh38.p12	First Pass	NC_000020.11	Chr20	2,499,185	2,499,495
nssv17968185	Submitted genomic		NC_000020.10:g.247 9831_2480141del	GRCh37 (hg19)		NC_000020.10	Chr20	2,479,831	2,480,141

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17968185	0.01	63	6398

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