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dbVar

Database of genomic structural variation

nsv6133707

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,140,003

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 7986 SVs from 102 studies. See in: genome view

Remapped(Score: Perfect):560,000-1,700,002

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6133707	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	560,000	1,700,002
nsv6133707	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000019.9	Chr19	560,000	1,700,001

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17681404	copy number loss	SAMN20524664	Sequencing	Paired-end mapping	739

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17681404	Remapped	Perfect	NC_000019.10:g.560 000_1700002del	GRCh38.p12	First Pass	NC_000019.10	Chr19	560,000	1,700,002
nssv17681404	Submitted genomic		NC_000019.9:g.5600 00_1700001del	GRCh37 (hg19)		NC_000019.9	Chr19	560,000	1,700,001

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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