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dbVar

Database of genomic structural variation

nsv6134771

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:78,414

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 331 SVs from 54 studies. See in: genome view

Remapped(Score: Good):175,386,493-175,464,906

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv6134771	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	175,386,493	175,386,493	175,464,906	175,464,906
nsv6134771	Remapped	Good	GRCh38.p12	PATCHES	Second Pass	NW_019805489.1	Chr3\|NW_01 9805489.1	60,010	60,010	138,418	138,418
nsv6134771	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	175,104,282	175,104,283	175,182,693	175,182,694

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17678075	inversion	SAMN20524659	Sequencing	Paired-end mapping	203

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv17678075	Remapped	Good	NW_019805489.1:g.( 60010_60010)_(1384 18_138418)inv	GRCh38.p12	Second Pass	NW_019805489.1	Chr3\|NW_01 9805489.1	60,010	60,010	138,418	138,418
nssv17678075	Remapped	Good	NC_000003.12:g.(17 5386493_175386493) _(175464906_175464 906)inv	GRCh38.p12	First Pass	NC_000003.12	Chr3	175,386,493	175,386,493	175,464,906	175,464,906
nssv17678075	Submitted genomic		NC_000003.11:g.(17 5104282_175104283) _(175182693_175182 694)inv	GRCh37 (hg19)		NC_000003.11	Chr3	175,104,282	175,104,283	175,182,693	175,182,694

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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