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dbVar

Database of genomic structural variation

nsv6135047

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:294,380

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 766 SVs from 63 studies. See in: genome view

Remapped(Score: Perfect):89,842,037-90,136,416

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv6135047	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	89,842,037	89,842,038	90,136,405	90,136,416
nsv6135047	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	90,763,188	90,763,189	91,057,556	91,057,567

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17681290	duplication	SAMN20524662	Sequencing	Paired-end mapping	1,603

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv17681290	Remapped	Perfect	NC_000004.12:g.(89 842037_89842038)_( 90136405_90136416) dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	89,842,037	89,842,038	90,136,405	90,136,416
nssv17681290	Submitted genomic		NC_000004.11:g.(90 763188_90763189)_( 91057556_91057567) dup	GRCh37 (hg19)		NC_000004.11	Chr4	90,763,188	90,763,189	91,057,556	91,057,567

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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