nsv6135136

  • Variant Calls:1
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:400,924

    Links to Other Resources

    Source: NCBI

    Genome View

    Select assembly:
    Overlapping variant regions from other studies: 1918 SVs from 95 studies. See in: genome view    
    Remapped(Score: Perfect):179,502,999-179,903,001Question Mark
    Overlapping variant regions from other studies: 1216 SVs from 76 studies. See in: genome view    
    Remapped(Score: Good):267,638-668,561Question Mark
    Overlapping variant regions from other studies: 1918 SVs from 95 studies. See in: genome view    
    Submitted genomic178,930,000-179,330,001Question Mark

    Variant Region Placement Information

    Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrStartStop
    nsv6135136RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000005.10Chr5179,502,999179,903,001
    nsv6135136RemappedGoodGRCh38.p12PATCHESSecond PassNW_016107298.1Chr5|NW_01
    6107298.1    		267,638668,561
    nsv6135136Submitted genomicGRCh37 (hg19)Primary AssemblyNC_000005.9Chr5178,930,000179,330,001

    Variant Call Information

    Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
    nssv17678210copy number lossSAMN20524662SequencingPaired-end mapping1,603

    Variant Call Placement Information

    Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrStartStop
    nssv17678210RemappedGoodNW_016107298.1:g.2
    67638_668561del    		GRCh38.p12Second PassNW_016107298.1Chr5|NW_01
    6107298.1    		267,638668,561
    nssv17678210RemappedPerfectNC_000005.10:g.179
    502999_179903001de
    l    		GRCh38.p12First PassNC_000005.10Chr5179,502,999179,903,001
    nssv17678210Submitted genomicNC_000005.9:g.1789
    30000_179330001del    		GRCh37 (hg19)NC_000005.9Chr5178,930,000179,330,001

    No validation data were submitted for this variant

    No clinical assertion data were submitted for this variant

    No genotype data were submitted for this variant

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