nsv6136985
- Organism: Homo sapiens
- Study:nstd213 (Pham et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,280,006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 5988 SVs from 100 studies. See in: genome view
Overlapping variant regions from other studies: 5989 SVs from 100 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6136985 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 20,130,377 | 22,410,382 |
| nsv6136985 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 20,170,000 | 22,450,001 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17682917 | copy number gain | SAMN20524654 | Sequencing | Paired-end mapping | 440 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17682917 | Remapped | Perfect | NC_000007.14:g.201 30377_22410382dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 20,130,377 | 22,410,382 |
| nssv17682917 | Submitted genomic | NC_000007.13:g.201 70000_22450001dup | GRCh37 (hg19) | NC_000007.13 | Chr7 | 20,170,000 | 22,450,001 |