Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6137178

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:translocation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 125 SVs from 22 studies. See in: genome view

Remapped(Score: Perfect):20,177,336-20,177,336

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv6137178	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	20,177,336	20,177,336	+
nsv6137178	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000009.12	Chr9	106,583,499	106,583,499	-
nsv6137178	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	20,177,567	20,177,567	+
nsv6137178	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000009.11	Chr9	109,345,780	109,345,780	-

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17683242	interchromosomal translocation	SAMN20524665	Sequencing	Paired-end mapping	405

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv17683242	Remapped	Perfect	GRCh38.p12	First Pass	NC_000006.12	Chr6	20,177,336	20,177,336	+
nssv17683242	Remapped	Perfect	GRCh38.p12	First Pass	NC_000009.12	Chr9	106,583,499	106,583,499	-
nssv17683242	Submitted genomic		GRCh37 (hg19)		NC_000006.11	Chr6	20,177,567	20,177,567	+
nssv17683242	Submitted genomic		GRCh37 (hg19)		NC_000009.11	Chr9	109,345,780	109,345,780	-

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI