nsv6137502
- Organism: Homo sapiens
- Study:nstd213 (Pham et al. 2021)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 99 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 124 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 99 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 124 SVs from 22 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv6137502 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 118,975,318 | 118,975,318 | + |
| nsv6137502 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 71,335,259 | 71,335,259 | - |
| nsv6137502 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 118,694,165 | 118,694,165 | + | ||
| nsv6137502 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000012.11 | Chr12 | 71,729,039 | 71,729,039 | - |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17677495 | interchromosomal translocation | SAMN20524660 | Sequencing | Paired-end mapping | 208 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv17677495 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 118,975,318 | 118,975,318 | + |
| nssv17677495 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 71,335,259 | 71,335,259 | - |
| nssv17677495 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 118,694,165 | 118,694,165 | + | ||
| nssv17677495 | Submitted genomic | GRCh37 (hg19) | NC_000012.11 | Chr12 | 71,729,039 | 71,729,039 | - |