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dbVar

Database of genomic structural variation

nsv6165677

Organism: Homo sapiens

Study:nstd214 (Naslavsky et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:50

Publication(s):Naslavsky et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 96 SVs from 20 studies. See in: genome view

Submitted genomic80,538,437-80,538,486

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6165677	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	80,538,437	80,538,486
nsv6165677	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	79,834,256	79,834,305

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17880564	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17880564	Submitted genomic		NC_000005.10:g.805 38437_80538486del	GRCh38 (hg38)		NC_000005.10	Chr5	80,538,437	80,538,486
nssv17880564	Remapped	Perfect	NC_000005.9:g.7983 4256_79834305del	GRCh37.p13	First Pass	NC_000005.9	Chr5	79,834,256	79,834,305

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17880564	<0.001	2	2078

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