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dbVar

Database of genomic structural variation

nsv6308898

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:5,461

Description:NC_000010.10:g.(?_104592258)_(104597718_?)del AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 55 SVs from 15 studies. See in: genome view

Remapped(Score: Perfect):102,832,501-102,837,961

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6308898	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	102,832,501	102,837,961
nsv6308898	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	104,592,258	104,597,718

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID
nssv17968711	deletion	Multiple	Multiple	not provided	Pathogenic	ClinVar	RCV001941912.2, VCV001454523.2

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv17968711	Remapped	Perfect	NC_000010.11:g.(?_ 102832501)_(102837 961_?)del	GRCh38.p12	First Pass	NC_000010.11	Chr10	102,832,501	102,837,961
nssv17968711	Submitted genomic		NC_000010.10:g.(?_ 104592258)_(104597 718_?)del	GRCh37 (hg19)		NC_000010.10	Chr10	104,592,258	104,597,718

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID
nssv17968711	GRCh37: NC_000010.10:g.(?_104592258)_(104597718_?)del	deletion	germline	not provided	Pathogenic	ClinVar	RCV001941912.2, VCV001454523.2

No genotype data were submitted for this variant

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