nsv6314141
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:33,223
- Description:GRCh37/hg19 16q12.2(chr16:56521157-56554379) AND not specified
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 111 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 111 SVs from 40 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6314141 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 56,487,245 | 56,520,467 |
| nsv6314141 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 56,521,157 | 56,554,379 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv17969067 | copy number loss | Multiple | Multiple | not specified | Uncertain significance | ClinVar | RCV002052531.3, VCV001526512.3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17969067 | Remapped | Perfect | NC_000016.10:g.(?_ 56487245)_(5652046 7_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 56,487,245 | 56,520,467 |
| nssv17969067 | Submitted genomic | NC_000016.9:g.(?_5 6521157)_(56554379 _?)del | GRCh37 (hg19) | NC_000016.9 | Chr16 | 56,521,157 | 56,554,379 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv17969067 | GRCh37: NC_000016.9:g.(?_56521157)_(56554379_?)del | copy number loss | germline | not specified | Uncertain significance | ClinVar | RCV002052531.3, VCV001526512.3 |