nsv6314273
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:complex chromosomal rearrangement
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:9
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1
- Description:
46;XY;inv(10)(q11.2q24)dn AND multiple conditions - Publication(s):Redin et al. 2016
- ClinVar: RCV000258533.2
- ClinVar: VCV000267853.1
- HP: 0000028
- HP: 0000960
- HP: 0001270
- HP: 0001822
- HP: 0008936
- HP: 0009487
- HP: 0012389
- HP: 0012873
- HP: 0030148
- MONDO: 0009047
- MedGen: C0010417
- MedGen: C0018536
- MedGen: C0018808
- MedGen: C0241521
- MedGen: C0266444
- MedGen: C0426848
- MedGen: C1853743
- MedGen: C1854301
- MedGen: C4022919
- OMIM: 219050
- PubMed: 27841880
- Overlapping Genes
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 51 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 51 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 47 SVs from 11 studies. See in: genome view
Overlapping variant regions from other studies: 47 SVs from 11 studies. See in: genome view
Overlapping variant regions from other studies: 50 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 50 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 49 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 49 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 1540 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 1538 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 69 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 69 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 66 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 66 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 63 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 63 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 51 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 51 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 47 SVs from 11 studies. See in: genome view
Overlapping variant regions from other studies: 47 SVs from 11 studies. See in: genome view
Overlapping variant regions from other studies: 47 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 47 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 49 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 49 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 580 SVs from 61 studies. See in: genome view
Overlapping variant regions from other studies: 581 SVs from 61 studies. See in: genome view
Overlapping variant regions from other studies: 69 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 69 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 66 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 66 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 63 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 63 SVs from 18 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 102,029,489 | 102,029,489 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 102,029,489 | 102,029,489 | - |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 102,229,416 | 102,229,416 | - |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 102,229,416 | 102,229,416 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 43,346,040 | 43,346,040 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 43,346,040 | 43,346,040 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 43,474,628 | 43,474,628 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 43,474,628 | 43,474,628 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 46,597,651 | 46,597,651 | - |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 46,598,916 | 46,598,916 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 68,691,517 | 68,691,517 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 68,691,517 | 68,691,517 | - |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 73,227,875 | 73,227,875 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 73,227,875 | 73,227,875 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 96,707,530 | 96,707,530 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 96,707,530 | 96,707,530 | - |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 96,885,146 | 96,885,146 | + |
nsv6314273 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 96,885,146 | 96,885,146 | - |
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 103,789,246 | 103,789,246 | - | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 103,789,246 | 103,789,246 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 103,989,173 | 103,989,173 | - | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 103,989,173 | 103,989,173 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 43,841,488 | 43,841,488 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 43,841,488 | 43,841,488 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 43,970,076 | 43,970,076 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 43,970,076 | 43,970,076 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 46,950,701 | 46,950,701 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 46,951,966 | 46,951,966 | - | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 70,451,274 | 70,451,274 | - | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 70,451,274 | 70,451,274 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 74,987,633 | 74,987,633 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 74,987,633 | 74,987,633 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 98,467,287 | 98,467,287 | - | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 98,467,287 | 98,467,287 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 98,644,903 | 98,644,903 | + | ||
nsv6314273 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 98,644,903 | 98,644,903 | - |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nssv17975233 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 43,346,040 | 43,346,040 | + | |
nssv17975235 | Remapped | Perfect | NC_000010.11:g.433 46040dupNC_000010. 11:g.43474628dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 43,346,040 | 43,346,040 | |
nssv17975230 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 43,474,628 | 43,474,628 | + | |
nssv17975235 | Remapped | Perfect | NC_000010.11:g.433 46040dupNC_000010. 11:g.43474628dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 43,474,628 | 43,474,628 | |
nssv17975232 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,597,651 | 46,597,651 | - | |
nssv17975234 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 46,598,916 | 46,598,916 | + | |
nssv17975231 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 68,691,517 | 68,691,517 | - | |
nssv17975236 | Remapped | Perfect | NC_000010.11:g.686 91517delNC_000010. 11:g.73227875del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 68,691,517 | 68,691,517 | |
nssv17975234 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 73,227,875 | 73,227,875 | + | |
nssv17975236 | Remapped | Perfect | NC_000010.11:g.686 91517delNC_000010. 11:g.73227875del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 73,227,875 | 73,227,875 | |
nssv17975233 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 96,707,530 | 96,707,530 | - | |
nssv17975237 | Remapped | Perfect | NC_000010.11:g.968 85146dupNC_000010. 11:g.96707530dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 96,707,530 | 96,707,530 | |
nssv17975232 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 96,885,146 | 96,885,146 | - | |
nssv17975237 | Remapped | Perfect | NC_000010.11:g.968 85146dupNC_000010. 11:g.96707530dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 96,885,146 | 96,885,146 | |
nssv17975231 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 102,029,489 | 102,029,489 | - | |
nssv17975238 | Remapped | Perfect | NC_000010.11:g.102 029489dupNC_000010 .11:g.102229416dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 102,029,489 | 102,029,489 | |
nssv17975230 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 102,229,416 | 102,229,416 | - | |
nssv17975238 | Remapped | Perfect | NC_000010.11:g.102 029489dupNC_000010 .11:g.102229416dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 102,229,416 | 102,229,416 | |
nssv17975233 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 43,841,488 | 43,841,488 | + | |||
nssv17975235 | Submitted genomic | NC_000010.10:g.439 70076dupNC_000010. 10:g.43841488dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 43,841,488 | 43,841,488 | |||
nssv17975230 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 43,970,076 | 43,970,076 | + | |||
nssv17975235 | Submitted genomic | NC_000010.10:g.439 70076dupNC_000010. 10:g.43841488dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 43,970,076 | 43,970,076 | |||
nssv17975234 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,950,701 | 46,950,701 | + | |||
nssv17975232 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 46,951,966 | 46,951,966 | - | |||
nssv17975231 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 70,451,274 | 70,451,274 | - | |||
nssv17975236 | Submitted genomic | NC_000010.10:g.704 51274delNC_000010. 10:g.74987633del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 70,451,274 | 70,451,274 | |||
nssv17975234 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 74,987,633 | 74,987,633 | + | |||
nssv17975236 | Submitted genomic | NC_000010.10:g.704 51274delNC_000010. 10:g.74987633del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 74,987,633 | 74,987,633 | |||
nssv17975233 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 98,467,287 | 98,467,287 | - | |||
nssv17975237 | Submitted genomic | NC_000010.10:g.986 44903dupNC_000010. 10:g.98467287dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 98,467,287 | 98,467,287 | |||
nssv17975232 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 98,644,903 | 98,644,903 | - | |||
nssv17975237 | Submitted genomic | NC_000010.10:g.986 44903dupNC_000010. 10:g.98467287dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 98,644,903 | 98,644,903 | |||
nssv17975231 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 103,789,246 | 103,789,246 | - | |||
nssv17975238 | Submitted genomic | NC_000010.10:g.103 789246dupNC_000010 .10:g.103989173dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 103,789,246 | 103,789,246 | |||
nssv17975230 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 103,989,173 | 103,989,173 | - | |||
nssv17975238 | Submitted genomic | NC_000010.10:g.103 789246dupNC_000010 .10:g.103989173dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 103,989,173 | 103,989,173 |