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dbVar

Database of genomic structural variation

nsv6344696

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,400

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 208 SVs from 53 studies. See in: genome view

Submitted genomic96,006,801-96,009,200

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6344696	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	96,006,801	96,009,200
nsv6344696	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	96,672,549	96,674,948

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18210725	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18210725	Submitted genomic		NC_000002.12:g.960 06801_96009200dup	GRCh38 (hg38)		NC_000002.12	Chr2	96,006,801	96,009,200
nssv18210725	Remapped	Perfect	NC_000002.11:g.966 72549_96674948dup	GRCh37.p13	First Pass	NC_000002.11	Chr2	96,672,549	96,674,948

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18210725	0.006	216	38288

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