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dbVar

Database of genomic structural variation

nsv6455882

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,151

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 115 SVs from 26 studies. See in: genome view

Submitted genomic88,502,476-88,503,626

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6455882	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	88,502,476	88,503,626
nsv6455882	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	88,235,644	88,236,794

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17995052	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17995052	Submitted genomic		NC_000011.10:g.885 02476_88503626del	GRCh38 (hg38)		NC_000011.10	Chr11	88,502,476	88,503,626
nssv17995052	Remapped	Perfect	NC_000011.9:g.8823 5644_88236794del	GRCh37.p13	First Pass	NC_000011.9	Chr11	88,235,644	88,236,794

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17995052	0.005	194	37852

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