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dbVar

Database of genomic structural variation

nsv6484845

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:17,497

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 128 SVs from 29 studies. See in: genome view

Submitted genomic54,383,995-54,401,491

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6484845	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000014.9	Chr14	54,383,995	54,401,491
nsv6484845	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000014.8	Chr14	54,850,713	54,868,209

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18183280	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18183280	Submitted genomic		NC_000014.9:g.5438 3995_54401491dup	GRCh38 (hg38)		NC_000014.9	Chr14	54,383,995	54,401,491
nssv18183280	Remapped	Perfect	NC_000014.8:g.5485 0713_54868209dup	GRCh37.p13	First Pass	NC_000014.8	Chr14	54,850,713	54,868,209

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18183280	<0.001	4	39248

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