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dbVar

Database of genomic structural variation

nsv6495952

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,391

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 143 SVs from 30 studies. See in: genome view

Submitted genomic89,518,560-89,520,950

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6495952	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000015.10	Chr15	89,518,560	89,520,950
nsv6495952	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	90,061,791	90,064,181

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18026885	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18026885	Submitted genomic		NC_000015.10:g.895 18560_89520950del	GRCh38 (hg38)		NC_000015.10	Chr15	89,518,560	89,520,950
nssv18026885	Remapped	Perfect	NC_000015.9:g.9006 1791_90064181del	GRCh37.p13	First Pass	NC_000015.9	Chr15	90,061,791	90,064,181

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18026885	<0.001	2	38848

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