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dbVar

Database of genomic structural variation

nsv6516013

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,800

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 982 SVs from 67 studies. See in: genome view

Submitted genomic46,539,101-46,541,900

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6516013	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000017.11	Chr17	46,539,101	46,541,900
nsv6516013	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000017.10	Chr17	44,616,467	44,619,266

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18194316	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18194316	Submitted genomic		NC_000017.11:g.465 39101_46541900dup	GRCh38 (hg38)		NC_000017.11	Chr17	46,539,101	46,541,900
nssv18194316	Remapped	Perfect	NC_000017.10:g.446 16467_44619266dup	GRCh37.p13	First Pass	NC_000017.10	Chr17	44,616,467	44,619,266

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18194316	0.083	2318	27918

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