Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6532013

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,228

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 135 SVs from 29 studies. See in: genome view

Submitted genomic37,254,374-37,255,601

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6532013	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	37,254,374	37,255,601
nsv6532013	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	37,745,276	37,746,503

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18046638	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18046638	Submitted genomic		NC_000019.10:g.372 54374_37255601del	GRCh38 (hg38)		NC_000019.10	Chr19	37,254,374	37,255,601
nssv18046638	Remapped	Perfect	NC_000019.9:g.3774 5276_37746503del	GRCh37.p13	First Pass	NC_000019.9	Chr19	37,745,276	37,746,503

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18046638	<0.001	3	38080

You are here: NCBI