nsv6620538
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:292,701
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1708 SVs from 68 studies. See in: genome view
Overlapping variant regions from other studies: 1727 SVs from 69 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6620538 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 38,512,081 | 38,804,781 |
| nsv6620538 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 38,801,009 | 39,097,912 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18307291 | duplication | OSC0681 | SNP array | Probe signal intensity | 5 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18307291 | Remapped | Good | NC_000010.11:g.(?_ 38512081)_(3880478 1_?)dup | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 38,512,081 | 38,804,781 |
| nssv18307291 | Submitted genomic | NC_000010.10:g.(?_ 38801009)_(3909791 2_?)dup | GRCh37 (hg19) | NC_000010.10 | Chr10 | 38,801,009 | 39,097,912 |