nsv6621231

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:29
Validation:Not tested
Clinical Assertions: No
Region Size:52,036

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 231 SVs from 36 studies. See in: genome view

Remapped(Score: Perfect):95,836,177-95,888,212

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6621231	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nsv6621231	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	95,569,341	95,621,376

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18281958	duplication	OSC2045	SNP array	Probe signal intensity	11
nssv18282112	duplication	OSC2166	SNP array	Probe signal intensity	9
nssv18282537	duplication	OSC0231	SNP array	Probe signal intensity	7
nssv18283054	duplication	OSC2402	SNP array	Probe signal intensity	5
nssv18283260	duplication	OSC2338	SNP array	Probe signal intensity	9
nssv18285124	duplication	OSC2544	SNP array	Probe signal intensity	6
nssv18286354	duplication	OSC2764	SNP array	Probe signal intensity	6
nssv18286510	duplication	OSC2882	SNP array	Probe signal intensity	nssv18286511, nssv18286509
nssv18286993	duplication	OSC3057	SNP array	Probe signal intensity	5
nssv18287140	duplication	OSC3149	SNP array	Probe signal intensity	7
nssv18288084	duplication	OSC3308	SNP array	Probe signal intensity	6
nssv18288164	duplication	OSC3204	SNP array	Probe signal intensity	7
nssv18288656	duplication	OSC3314	SNP array	Probe signal intensity	5
nssv18288793	duplication	OSC3196	SNP array	Probe signal intensity	9
nssv18289021	duplication	OSC3317	SNP array	Probe signal intensity	8
nssv18289417	duplication	OSC3437	SNP array	Probe signal intensity	nssv18289415, nssv18289416, nssv18289418
nssv18290316	duplication	OSC3598	SNP array	Probe signal intensity	8
nssv18290467	duplication	OSC3711	SNP array	Probe signal intensity	nssv18290466, nssv18291055, nssv18291354
nssv18290501	duplication	OSC3737	SNP array	Probe signal intensity	11
nssv18291082	duplication	OSC3733	SNP array	Probe signal intensity	6
nssv18291111	duplication	OSC3748	SNP array	Probe signal intensity	7
nssv18291623	duplication	OSC3876	SNP array	Probe signal intensity	5
nssv18297633	duplication	OSC0049	SNP array	Probe signal intensity	nssv18297691
nssv18304414	duplication	OSC0631	SNP array	Probe signal intensity
nssv18307759	duplication	OSC0719	SNP array	Probe signal intensity	6
nssv18308745	duplication	OSC0724	SNP array	Probe signal intensity	8
nssv18322239	duplication	OSC1317	SNP array	Probe signal intensity	nssv18321338, nssv18322627
nssv18326121	duplication	OSC2003	SNP array	Probe signal intensity	5
nssv18326238	duplication	OSC2016	SNP array	Probe signal intensity	nssv18326237, nssv18326016, nssv18326132

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18281958	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18282112	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18282537	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18283054	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18283260	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18285124	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18286354	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18286510	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18286993	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18287140	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18288084	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18288164	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18288656	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18288793	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18289021	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18289417	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18290316	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18290467	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18290501	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18291082	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18291111	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18291623	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18297633	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18304414	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18307759	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18308745	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18322239	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18326121	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18326238	Remapped	Perfect	NC_000011.10:g.(?_ 95836177)_(9588821 2_?)dup	GRCh38.p12	First Pass	NC_000011.10	Chr11	95,836,177	95,888,212
nssv18281958	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18282112	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18282537	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18283054	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18283260	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18285124	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18286354	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18286510	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18286993	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18287140	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18288084	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18288164	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18288656	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18288793	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18289021	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18289417	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18290316	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18290467	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18290501	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18291082	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18291111	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18291623	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18297633	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18304414	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18307759	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18308745	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18322239	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18326121	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376
nssv18326238	Submitted genomic		NC_000011.9:g.(?_9 5569341)_(95621376 _?)dup	GRCh37 (hg19)		NC_000011.9	Chr11	95,569,341	95,621,376

dbVar

Database of genomic structural variation

nsv6621231

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant