nsv6622126
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,418,375
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 4890 SVs from 105 studies. See in: genome view
Overlapping variant regions from other studies: 4890 SVs from 105 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6622126 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 22,971,857 | 24,390,231 |
| nsv6622126 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000013.10 | Chr13 | 23,545,996 | 24,964,369 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18310331 | deletion | OSC7181 | SNP array | Probe signal intensity | 13 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18310331 | Remapped | Perfect | NC_000013.11:g.(?_ 22971857)_(2439023 1_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 22,971,857 | 24,390,231 |
| nssv18310331 | Submitted genomic | NC_000013.10:g.(?_ 23545996)_(2496436 9_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 23,545,996 | 24,964,369 |