nsv6622217
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:27
- Validation:Not tested
- Clinical Assertions: No
- Region Size:46,155
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 569 SVs from 69 studies. See in: genome view
Overlapping variant regions from other studies: 569 SVs from 69 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6622217 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nsv6622217 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18282646 | deletion | OSC2103 | SNP array | Probe signal intensity | 6 |
| nssv18282862 | deletion | OSC2267 | SNP array | Probe signal intensity | nssv18283492 |
| nssv18283564 | deletion | OSC2312 | SNP array | Probe signal intensity | nssv18283226, nssv18283845, nssv18283563 |
| nssv18283794 | deletion | OSC2278 | SNP array | Probe signal intensity | nssv18283795 |
| nssv18285021 | deletion | OSC2474 | SNP array | Probe signal intensity | nssv18283419, nssv18284090, nssv18285022 |
| nssv18285103 | deletion | OSC2524 | SNP array | Probe signal intensity | 8 |
| nssv18286212 | deletion | OSC2902 | SNP array | Probe signal intensity | 7 |
| nssv18287849 | deletion | OSC3152 | SNP array | Probe signal intensity | 10 |
| nssv18287924 | deletion | OSC3200 | SNP array | Probe signal intensity | 9 |
| nssv18288602 | deletion | OSC3280 | SNP array | Probe signal intensity | nssv18288268 |
| nssv18289079 | deletion | OSC3373 | SNP array | Probe signal intensity | nssv18289322, nssv18289323 |
| nssv18289520 | deletion | OSC3523 | SNP array | Probe signal intensity | 11 |
| nssv18291427 | deletion | OSC3757 | SNP array | Probe signal intensity | 8 |
| nssv18291949 | deletion | OSC3939 | SNP array | Probe signal intensity | 7 |
| nssv18292445 | deletion | OSC3816 | SNP array | Probe signal intensity | 5 |
| nssv18294914 | deletion | OSC4254 | SNP array | Probe signal intensity | 7 |
| nssv18295939 | deletion | OSC4583 | SNP array | Probe signal intensity | 7 |
| nssv18296629 | deletion | OSC0496 | SNP array | Probe signal intensity | nssv18296864 |
| nssv18296988 | deletion | OSC4907 | SNP array | Probe signal intensity | nssv18296989, nssv18296990 |
| nssv18297472 | deletion | OSC4772 | SNP array | Probe signal intensity | nssv18297473, nssv18296567, nssv18296566 |
| nssv18298176 | deletion | OSC5104 | SNP array | Probe signal intensity | 8 |
| nssv18298797 | deletion | OSC0518 | SNP array | Probe signal intensity | 7 |
| nssv18310274 | deletion | OSC0754 | SNP array | Probe signal intensity | 8 |
| nssv18322066 | deletion | OSC1192 | SNP array | Probe signal intensity | nssv18321782, nssv18322067 |
| nssv18322722 | deletion | OSC1384 | SNP array | Probe signal intensity | 6 |
| nssv18324008 | deletion | OSC1653 | SNP array | Probe signal intensity | 7 |
| nssv18324431 | deletion | OSC1747 | SNP array | Probe signal intensity | 8 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18282646 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18282862 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18283564 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18283794 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18285021 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18285103 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18286212 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18287849 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18287924 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18288602 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18289079 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18289520 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18291427 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18291949 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18292445 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18294914 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18295939 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18296629 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18296988 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18297472 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18298176 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18298797 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18310274 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18322066 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18322722 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18324008 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18324431 | Remapped | Perfect | NC_000013.11:g.(?_ 83537638)_(8358379 2_?)del | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 83,537,638 | 83,583,792 |
| nssv18282646 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18282862 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18283564 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18283794 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18285021 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18285103 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18286212 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18287849 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18287924 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18288602 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18289079 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18289520 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18291427 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18291949 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18292445 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18294914 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18295939 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18296629 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18296988 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18297472 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18298176 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18298797 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18310274 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18322066 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18322722 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18324008 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 | ||
| nssv18324431 | Submitted genomic | NC_000013.10:g.(?_ 84111773)_(8415792 7_?)del | GRCh37 (hg19) | NC_000013.10 | Chr13 | 84,111,773 | 84,157,927 |