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dbVar

Database of genomic structural variation

nsv6622597

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:7
Validation:Not tested
Clinical Assertions: No
Region Size:147,670

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1149 SVs from 80 studies. See in: genome view

Remapped(Score: Perfect):19,839,089-19,986,758

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6622597	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	19,839,089	19,986,758
nsv6622597	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	20,044,342	20,192,011

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18302668	deletion	OSC5893	SNP array	Probe signal intensity	12
nssv18311202	deletion	OSC7380	SNP array	Probe signal intensity	5
nssv18313127	duplication	OSC7644	SNP array	Probe signal intensity	8
nssv18313558	duplication	OSC7768	SNP array	Probe signal intensity	10
nssv18314687	deletion	OSC7905	SNP array	Probe signal intensity	10
nssv18315054	deletion	OSC8131	SNP array	Probe signal intensity	15
nssv18315380	deletion	OSC8084	SNP array	Probe signal intensity	6

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18302668	Remapped	Perfect	NC_000015.10:g.(?_ 19839089)_(1998675 8_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	19,839,089	19,986,758
nssv18311202	Remapped	Perfect	NC_000015.10:g.(?_ 19839089)_(1998675 8_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	19,839,089	19,986,758
nssv18313127	Remapped	Perfect	NC_000015.10:g.(?_ 19839089)_(1998675 8_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	19,839,089	19,986,758
nssv18313558	Remapped	Perfect	NC_000015.10:g.(?_ 19839089)_(1998675 8_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	19,839,089	19,986,758
nssv18314687	Remapped	Perfect	NC_000015.10:g.(?_ 19839089)_(1998675 8_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	19,839,089	19,986,758
nssv18315054	Remapped	Perfect	NC_000015.10:g.(?_ 19839089)_(1998675 8_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	19,839,089	19,986,758
nssv18315380	Remapped	Perfect	NC_000015.10:g.(?_ 19839089)_(1998675 8_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	19,839,089	19,986,758
nssv18302668	Submitted genomic		NC_000015.9:g.(?_2 0044342)_(20192011 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	20,044,342	20,192,011
nssv18311202	Submitted genomic		NC_000015.9:g.(?_2 0044342)_(20192011 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	20,044,342	20,192,011
nssv18313127	Submitted genomic		NC_000015.9:g.(?_2 0044342)_(20192011 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	20,044,342	20,192,011
nssv18313558	Submitted genomic		NC_000015.9:g.(?_2 0044342)_(20192011 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	20,044,342	20,192,011
nssv18314687	Submitted genomic		NC_000015.9:g.(?_2 0044342)_(20192011 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	20,044,342	20,192,011
nssv18315054	Submitted genomic		NC_000015.9:g.(?_2 0044342)_(20192011 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	20,044,342	20,192,011
nssv18315380	Submitted genomic		NC_000015.9:g.(?_2 0044342)_(20192011 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	20,044,342	20,192,011

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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