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dbVar

Database of genomic structural variation

nsv6623913

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:57,678

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 522 SVs from 61 studies. See in: genome view

Remapped(Score: Perfect):77,985,856-78,043,533

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6623913	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	77,985,856	78,043,533
nsv6623913	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	78,019,753	78,077,430

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18291989	deletion	OSC3964	SNP array	Probe signal intensity	10
nssv18292382	deletion	OSC3992	SNP array	Probe signal intensity	nssv18292383, nssv18292723
nssv18317430	deletion	OSC8464	SNP array	Probe signal intensity	10

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18291989	Remapped	Perfect	NC_000016.10:g.(?_ 77985856)_(7804353 3_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	77,985,856	78,043,533
nssv18292382	Remapped	Perfect	NC_000016.10:g.(?_ 77985856)_(7804353 3_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	77,985,856	78,043,533
nssv18317430	Remapped	Perfect	NC_000016.10:g.(?_ 77985856)_(7804353 3_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	77,985,856	78,043,533
nssv18291989	Submitted genomic		NC_000016.9:g.(?_7 8019753)_(78077430 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	78,019,753	78,077,430
nssv18292382	Submitted genomic		NC_000016.9:g.(?_7 8019753)_(78077430 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	78,019,753	78,077,430
nssv18317430	Submitted genomic		NC_000016.9:g.(?_7 8019753)_(78077430 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	78,019,753	78,077,430

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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