nsv6624961
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:4
- Validation:Not tested
- Clinical Assertions: No
- Region Size:31,722
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1030 SVs from 87 studies. See in: genome view
Overlapping variant regions from other studies: 1030 SVs from 87 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv6624961 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 40,850,020 | 40,881,741 |
nsv6624961 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000019.9 | Chr19 | 41,355,925 | 41,387,646 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv18301934 | deletion | OSC5865 | SNP array | Probe signal intensity | 10 |
nssv18303096 | deletion | OSC6020 | SNP array | Probe signal intensity | 9 |
nssv18308173 | deletion | OSC6766 | SNP array | Probe signal intensity | 10 |
nssv18319809 | deletion | OSC8831 | SNP array | Probe signal intensity | 15 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv18301934 | Remapped | Perfect | NC_000019.10:g.(?_ 40850020)_(4088174 1_?)del | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 40,850,020 | 40,881,741 |
nssv18303096 | Remapped | Perfect | NC_000019.10:g.(?_ 40850020)_(4088174 1_?)del | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 40,850,020 | 40,881,741 |
nssv18308173 | Remapped | Perfect | NC_000019.10:g.(?_ 40850020)_(4088174 1_?)del | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 40,850,020 | 40,881,741 |
nssv18319809 | Remapped | Perfect | NC_000019.10:g.(?_ 40850020)_(4088174 1_?)del | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 40,850,020 | 40,881,741 |
nssv18301934 | Submitted genomic | NC_000019.9:g.(?_4 1355925)_(41387646 _?)del | GRCh37 (hg19) | NC_000019.9 | Chr19 | 41,355,925 | 41,387,646 | ||
nssv18303096 | Submitted genomic | NC_000019.9:g.(?_4 1355925)_(41387646 _?)del | GRCh37 (hg19) | NC_000019.9 | Chr19 | 41,355,925 | 41,387,646 | ||
nssv18308173 | Submitted genomic | NC_000019.9:g.(?_4 1355925)_(41387646 _?)del | GRCh37 (hg19) | NC_000019.9 | Chr19 | 41,355,925 | 41,387,646 | ||
nssv18319809 | Submitted genomic | NC_000019.9:g.(?_4 1355925)_(41387646 _?)del | GRCh37 (hg19) | NC_000019.9 | Chr19 | 41,355,925 | 41,387,646 |