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dbVar

Database of genomic structural variation

nsv6625527

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:61,396

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 544 SVs from 76 studies. See in: genome view

Remapped(Score: Perfect):105,485,125-105,546,520

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6625527	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	105,485,125	105,546,520
nsv6625527	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	106,027,747	106,089,142

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18310135	duplication	OSC7215	SNP array	Probe signal intensity	12
nssv18310227	duplication	OSC7272	SNP array	Probe signal intensity	8
nssv18314114	duplication	OSC7833	SNP array	Probe signal intensity	10
nssv18319020	duplication	OSC8674	SNP array	Probe signal intensity	11

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18310135	Remapped	Perfect	NC_000001.11:g.(?_ 105485125)_(105546 520_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	105,485,125	105,546,520
nssv18310227	Remapped	Perfect	NC_000001.11:g.(?_ 105485125)_(105546 520_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	105,485,125	105,546,520
nssv18314114	Remapped	Perfect	NC_000001.11:g.(?_ 105485125)_(105546 520_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	105,485,125	105,546,520
nssv18319020	Remapped	Perfect	NC_000001.11:g.(?_ 105485125)_(105546 520_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	105,485,125	105,546,520
nssv18310135	Submitted genomic		NC_000001.10:g.(?_ 106027747)_(106089 142_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	106,027,747	106,089,142
nssv18310227	Submitted genomic		NC_000001.10:g.(?_ 106027747)_(106089 142_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	106,027,747	106,089,142
nssv18314114	Submitted genomic		NC_000001.10:g.(?_ 106027747)_(106089 142_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	106,027,747	106,089,142
nssv18319020	Submitted genomic		NC_000001.10:g.(?_ 106027747)_(106089 142_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	106,027,747	106,089,142

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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