nsv6625620
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:299,814
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1824 SVs from 102 studies. See in: genome view
Overlapping variant regions from other studies: 2358 SVs from 108 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6625620 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 12,852,648 | 13,152,461 |
| nsv6625620 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 12,912,501 | 13,374,928 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18287648 | deletion | OSC3043 | SNP array | Probe signal intensity | nssv18287649 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18287648 | Remapped | Pass | NC_000001.11:g.(?_ 12852648)_(1315246 1_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 12,852,648 | 13,152,461 |
| nssv18287648 | Submitted genomic | NC_000001.10:g.(?_ 12912501)_(1337492 8_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 12,912,501 | 13,374,928 |