nsv6625626
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:43,526
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1113 SVs from 76 studies. See in: genome view
Overlapping variant regions from other studies: 1113 SVs from 76 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6625626 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 1,468,420 | 1,511,945 |
| nsv6625626 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 1,403,800 | 1,447,325 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18301953 | deletion | OSC5602 | SNP array | Probe signal intensity | nssv18301319, nssv18301356 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18301953 | Remapped | Perfect | NC_000001.11:g.(?_ 1468420)_(1511945_ ?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 1,468,420 | 1,511,945 |
| nssv18301953 | Submitted genomic | NC_000001.10:g.(?_ 1403800)_(1447325_ ?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 1,403,800 | 1,447,325 |