nsv6625655
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:50,336
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1108 SVs from 85 studies. See in: genome view
Overlapping variant regions from other studies: 1108 SVs from 85 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6625655 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 1,665,912 | 1,716,247 |
| nsv6625655 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 1,597,351 | 1,647,686 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18288082 | deletion | OSC3306 | SNP array | Probe signal intensity | nssv18288643, nssv18288937, nssv18288938 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18288082 | Remapped | Perfect | NC_000001.11:g.(?_ 1665912)_(1716247_ ?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 1,665,912 | 1,716,247 |
| nssv18288082 | Submitted genomic | NC_000001.10:g.(?_ 1597351)_(1647686_ ?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 1,597,351 | 1,647,686 |